Book Publications    Chapter Publications    Journal Publications     Conference Publications

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Book Publications

ROWE DB. Multivariate Bayesian Statistics: Models for Source Separation and Signal Unmixing. CRC Press: Boca Raton, FL, USA (2003). ISBN: 1584883189. Available from CRC Press, Amazon.com, or BN.com. Book Webpage. Here are a couple reviews: JASA Review, Technometrics Review. In here Bayesian source separation and Bayesian factor analysis is described.

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Chapter Publications

2011

Barth M, ROWE DB. Functional susceptibility weighted magnetic resonance imaging, in: MRI Susceptibility Weighted Imaging: Basic Concepts and Clinical Applications (pp 561-575). eds. Haacke EM, Reichenbach J John Wiley & Sons, January 2011.

ROWE DB, Jiang J, Haacke EM. Complex threshold methods for eliminating pixels that contain predominantly noise in magnetic resonance images, in: MRI Susceptibility Weighted Imaging: Basic Concepts and Clinical Applications (pp 577-603). eds. Haacke EM, Reichenbach J John Wiley & Sons, January 2011.

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Journal Publications

2012

Bruce IP, Karaman MM, ROWE DB: The SENSE-Isomorphism Theoretical Image Voxel Estimation (SENSE-ITIVE) Model for Reconstruction and Observing Statistical Properties of Reconstruction Operators. Magn. Reson. Imaging, Accepted, 2012.

Hahn AD, ROWE DB: Physiologic noise regression, motion regression, and TOAST dynamic field correction in complex-valued fMRI time series. Neuroimage, 59(3):2231–2240 (2012).

Hahn AD, Nencka AS, ROWE DB: Enhancing the utility of complex-valued fMRI detection of neurobiological processes through post-acquisition estimation and correction of dynamic B₀ errors and motion. Hum. Brain. Mapp., 33(2): (2012).

2011

Bruce IP, Karaman MM, ROWE DB: A Statistical Examination of SENSE Image Reconstruction via an Isomorphism Representation. Magn. Reson. Imaging 29(9):1267-1287 (2011).

Hettinger PC, Li R, Yan J-G, Matloub HS, Cho YR, Pawela CP, ROWE DB, Hyde JS: Long-term vascular access ports as a means of sedative administration in a rodent fMRI survival model. J. Neurosci. Methods 200(2):106:112 (2011).

2010

Hernandez-Garcia L, Jahanian H, ROWE DB. Quantitative Analysis of Arterial Spin labeling FMRI Data using a General Linear Model. Magn. Reson. Imaging, 28(7):919-927 (2010).

2009

Hahn AD, Nencka AS, ROWE DB. Improving robustness and reliability of phase-sensitive fMRI analysis using temporal off-resonance alignment of single-echo timeseries (TOAST). Neuroimage 44(3):742-752 (2009).

Zhu H, Li Y, Ibrahim JG, Shi X, An H, Chen Y, Lin W, ROWE DB, Peterson BS. Rician regression models for magnetic resonance images. J. Am. Stat. Assoc. 104(486):623-637 (2009).

Nencka AS, Hahn AD, ROWE DB. A Mathematical model for understanding the statistical effects of k-space (AMMUST-k) preprocessing on observed voxel measurements in fcMRI and fMRI. J. Neurosci. Methods 181(2):268-282 (2009).

ROWE DB, Haacke EM. Magnitude and phase thresholding (MAPHT) of noisy complex-valued magnetic resonance images. Magn. Reson. Imaging 27(9):1271–1280 (2009).

ROWE DB. Magnitude and phase signal detection in complex-valued fMRI data. Magn. Reson. Med. 62(5):1356–1357 (2009).

ROWE DB, Hahn AD, Nencka AS. Functional MRI brain activation directly from k-space. Magn. Reson. Imaging 27(10):1370-1381, 2009.

Hernandez-Garcia L, Vazquez AL, ROWE DB. Complex-valued analysis of arterial spin labeling based fMRI signals. Magn. Reson. Med. 62(6):1597-1608, 2009.

2008

Logan BR, Geliazkova MP, ROWE DB. An evaluation of spatial thresholding techniques in fMRI analysis. Hum. Brain Mapp. 29(12):1379-1389 (2008).

Xu Y, Xu G, Wu G, Antuono P, ROWE DB, Li S-J. The phase shift index for marking abnormal functional asynchrony in Alzheimer’s patients by fMRI. Magn. Reson. Imaging 26(3):379-392 (2008).

2007

Nencka AS, ROWE DB. Reducing the unwanted draining vein BOLD contribution in fMRI with statistical post-processing methods. Neuroimage 37(1):177-188 (2007).

Kufahl PR, ROWE DB, Li S-J. Processing of drug-induced BOLD responses with Bayesian source separation. Digital Signal Processing 17(5):975-978 (2007).

Xu Y, Wu G, Ma Y, Xu G, ROWE DB, Li S-J. COMBE: Complex model based estimation of thermal noise for fMRI data in the presence of artifacts. Magn. Reson. Imaging 25(7):1079-1088 (2007).

Zhu H, Ibrahim JG, Tang N, ROWE DB, Hau X, Bansal R, Peterson BS. Statistical analysis of brain morphometric measures: A wild bootstrap method. IEEE Trans. Med. Imaging 26(7):954-966 (2007).

ROWE DB, Nencka AS, Hoffmann RG. Signal and noise of Fourier reconstructed fMRI data. J. Neurosci. Methods 159(2):361-369 (2007).

ROWE DB, Meller CP, Hoffmann RG. Characterizing phase-only fMRI data with an angular regression model. J. Neurosci. Methods 161(2):331-341 (2007).
Grether DM, Plott CR, ROWE DB, Sereno MI, Allman JM. For a few dollars more: An fMRI study of selling in auctions. Experimental Economics 10(2):105-122 (2007).

2006

ROWE DB, Hoffmann RG. Multivariate Statistical Analysis in fMRI. IEEE Eng Med Biol Med 25(2):60-64 (2006).

2005

ROWE DB. Modeling both the magnitude and phase of complex-valued fMRI data. Neuroimage 25(4):1310-1324 (2005).

ROWE DB. Parameter estimation in the magnitude-only and complex-valued fMRI data models. Neuroimage 25(4):1124-1132 (2005).

ROWE DB, Logan BR. Complex fMRI analysis with unrestricted phase is equivalent to a magnitude-only model. Neuroimage 24(2):603-606 (2005).

2004

ROWE DB, Logan BR. A complex way to compute fMRI activation. Neuroimage 23(3):1078-1092 (2004).

Logan BR, ROWE DB. An evaluation of thresholding techniques in fMRI analysis. Neuroimage 22(1):95-108 (2004).

2003

ROWE DB. Significant fMRI neurologic synchrony using Monte Carlo methods. Monte Carlo Methods and Applications 9(4):367-385 (2003).

ROWE DB. On using the sample mean in Bayesian factor analysis. J. Interdiscip. Math. 6(3):319-329 (2003).

Bennett KM, Schmainda KM, Bennett R, ROWE DB, Lu H, Hyde JS. Characterization of continuously distributed cortical water diffusion rates with a stretched-exponential model. Magn. Reson. Med. 50(4):727-734 (2003).

ROWE DB. Bayesian source separation of functional sources. J. Interdiscip. Math. 6(2):129-138 (2003).

ROWE DB. Jointly distributed mean and mixing coefficients for Bayesian source separation using MCMC and ICM. Monte Carlo Methods and Applications 8(4):395-403 (2003).

2002 and earlier

ROWE DB. A Bayesian approach to blind source separation. J. Interdiscip. Math. 5(1):49-76 (2002).

ROWE DB. A Bayesian source separation for reference function determination in fMRI. Magn. Reson. Med. 46(2):374-378 (2001).

ROWE DB. Factorization of seperable and patterned covariance matrices for Gibbs sampling. Monte Carlo Methods and Applications 6(3):205-210 (2000).

Heinsen AP, ROWE DB. A comparison of CF4+hydrocarbon fast gases for drift chambers and straw tubes. Nucl. Instrum. Methods Phys. Res. A 321(1-2):165-171 (1992). 

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Conference Publications

2011

Rowe DB: Utilizing Induced Voxel Correlation in fMRI Analysis. Proc. Am. Stat. Assoc., Biometrics Section, 16:, 2011.

2010

Nencka AS, Hahn AD, Rowe, DB: Phase Regression and Dynamic B-Field Correction Reduce Global Time Series Correlations and Increase Functional. Proc. Second Biennial International Conference on Resting State Connectivity, Medical College of Wisconsin, Milwaukee, Wisconsin, 2010. http://www.restingstate.com/

ROWE DB, Bruce IP: Processing Induced Voxel Correlation in SENSE FMRI Via the AMMUST Framework. Proc. Second Biennial International Conference on Resting State Connectivity, Medical College of Wisconsin, Milwaukee, Wisconsin, F052, 2010. http://www.restingstate.com/

Adrian DW, Maitra R, ROWE DB. Time Series Models for Computing Activation in fMRI. Fifth International Workshop on Statistical Analysis of Neuronal Data (SAND5), University of Pittsburgh, Pittsburgh, PA, 2010. http://sand.stat.cmu.edu/

Hahn AD, Nencka AS, ROWE DB. In fMRI, a dual echo time EPI pulse sequence can induce sources of error in dynamic B-field maps. Proc. Intl. Soc. Magn. Reson. Med. 18:5062, Stockholm, Sweden, 2010.

Hahn AD, Nencka AS, ROWE DB. Iterative space transformation enables the use of optimal magnetic field correction algorithms using EPI-based field maps. Proc. Intl. Soc. Magn. Reson. Med. 18:3092, Stockholm, Sweden, 2010.

Hahn AD, ROWE DB. Methodology for robust motion correction of complex-valued fMRI time series. Proc. Intl. Soc. Magn. Reson. Med. 18:3051, Stockholm, Sweden, 2010.

Mazaheri Y, ROWE DB, Zhang J, Hricak H, Koutcher JA. Improved Robustness with a Stretched Exponential Model for Intravoxel Incoherent Motion (IVIM) DW Signal. Proc. Intl. Soc. Magn. Reson. Med. 18:2655, Stockholm, Sweden, 2010.

Nencka AS, Shefchik D, Jesmanowicz A, Hyde JS, ROWE DB. A statistical method for computing BOLD activations in multi-echo time fMRI data sets and identifying likely non-BOLD task related signal change. Proc. Intl. Soc. Magn. Reson. Med. 18:1154, Stockholm, Sweden, 2010.

2009

Hernandez-Garcia L, ROWE DB. Quantitative General Linear Model Analysis of Arterial Spin labeling Data. Proc. Organization for Hum. Brain Mapp. 15th Annual Meeting, Neuroimage 47 ( Supplement 1), S82:530, 2009.

ROWE DB, Haacke EM. Complex-valued voxel thresholding increases image contrast in SWI. Proc. Intl. Soc. Magn. Reson. Med., 17:2923, 2009.

Hahn AD, Nencka AS, ROWE DB. Dynamic magnetic field corrections improve phase-only fMRI activations. Proc. Intl. Soc. Magn. Reson. Med., 17:2789, 2009.

ROWE DB, Nencka AS. Induced Correlation In FMRI Magnitude Data From k-Space Preprocessing. Proc. Intl. Soc. Magn. Reson. Med., 17:1721, 2009.

ROWE DB, Hernandez-Garcia L. An Analytic Magnitude and Phase fMRI Activation Model Applied to ASL. Proc. Intl. Soc. Magn. Reson. Med., 17:1716, 2009.

Nencka AS, Hahn AD, ROWE DB. Phase regression and dynamic B-field correction reduce global time series correlations and increase functional correlations. Proc. Intl. Soc. Magn. Reson. Med., 17:1663, 2009.

2008

Hoffmann RG, Pajewski NM, DeYoe EA, ROWE DB. A Non-Parametric Mixture Model for the fMRI Visual Field Map. Proc. Am. Stat. Assoc., Statistical Computing Section, 13:3782-3789, 2008.

ROWE DB, Haacke EM. Thresholding Complex Magnetic Resonance Images Using Magnitude and Phase. Proc. Am. Stat. Assoc., Biometrics Section, 13:1922-1929, 2008.

Hernandez-Garcia L, ROWE DB. A model for phase information in arterial spin labeling fMRI. Proc. Organization for Hum. Brain Mapp. 14th Annual Meeting, Neuroimage 41(Supplement l), S90:519, 2008.

Hahn AD, Nencka AS, ROWE DB. Dynamic Compensation of B0 Field Inhomogeneities Restores Complex fMRI Time Series Activation Power. Proc. Intl. Soc. Magn. Reson. Med., 16:1251, 2008.

Nencka AS, Paulson ES, ROWE DB. Complex Constant Phase Statistical Model Reduces Venous Contributions to BOLD Cortical Activations in the Visual Cortex. Proc. Intl. Soc. Magn. Reson. Med., 16:2338, 2008.

Nencka AS, Hahn AD, ROWE DB. Redundant Spatial Harmonic Information in Zeugmatography with Linear Encoding (R-SHIZLE) Theoretically Encodes Intra-Acquisition Decay. Proc. Intl. Soc. Magn. Reson. Med., 16:3157, 2008.

Nencka AS, ROWE DB. The use of Three Navigator Echoes in Cartesian EPI Reconstruction Reduces Nyquist Ghosting. Proc. Intl. Soc. Magn. Reson. Med., 16:3032, 2008.

Nencka AS, ROWE DB. Apodization and Smoothing Alter Voxel Time Series Correlations. Proc. Intl. Soc. Magn. Reson. Med., 16:2457, 2008.

2007

ROWE DB. FMRI statistical brain activation from k-space data. Proc. Am. Stat. Assoc. Biometrics Section, 12:107-114, 2007.

Hoffmann RG, DeYoe EA, Maciejewski MJ, ROWE DB. Estimation of Pre-Post Surgical Changes in the fMRI Visual Field Map. Proc. Am. Stat. Assoc. Biometrics Section, 12:383-388, 2007.<

ROWE DB. FMRI Activation in image space from k-space data. Proc. Organization for Hum. Brain Mapp. 13th Annual Meeting, NeuroImage 37(Supplement 1), S114:377, 2007.

Nencka AS, ROWE DB. Image space correlations induced by k-space processes. Proc. Organization for Hum. Brain Mapp. 13th Annual Meeting, Neuroimage 37 (Supplement 1), S55:284, 2007.

Logan BR, Geliazkova MP, Laud PW, ROWE DB. A Bayesian Spatial Mixture Model for fMRI Analysis. Proc. Organization for Hum. Brain Mapp. 13th Annual Meeting, NeuroImage 37(Supplement 1),S45:317, 2007.

Hoffmann RG, Macjewskii MJ, DeYoe EA, ROWE DB. Spatial Statistical Methods for Detecting Changes in Visual Field Maps, Proc. Organization for Hum. Brain Mapp. 13th Annual Meeting, Neuroimage 37(Supplement 1), S45:311, 2007.

ROWE DB, Li S-J. Two fMRI indices as markers for Alzheimer’s disease. Proc. Intl. Soc. Magn. Reson. Med. 15:3728, 2007.

Nencka AS, ROWE DB. Constant phase statistical method better localizes activations than phase regressor statistical method. Proc. Intl. Soc. Magn. Reson. Med. 15:3198, 2007.

ROWE DB, Hernandez-Garcia L, Lee GR. Complex analysis of ASL fMRI data yields more focal activation. Proc. Intl. Soc. Magn. Reson. Med. 15:1422, 2007.

2006

Hoffmann RG, Maciejewski MJ, ROWE DB, DeYoe EA. Assessing changes in the fMRI visual field map after surgery for epilepsy, Proc. Intl. Biometrics Conference, Montreal, Quebec, Canada, 2006.

ROWE DB, Nencka AS, Hoffmann RG. Intrinsic voxel correlation in fMRI. Proc. Am. Stat. Assoc. Biometrics Section, 11:338-345, 2006.

Hoffmann RG, Maciejewski MJ, Savarapian P, DeYoe EA, ROWE DB. Methods for assessing changes in the fMRI visual field map after surgery. Proc. Am. Stat. Assoc. Biometrics Section, 11: 2062-2067, 2006.

Kufahl PR, ROWE DB, Li S-J. Bayesian source separation of drug-induced BOLD responses with correlated reference functions. Proc. Intl. Soc. Magn. Reson. Med. 14:1160, 2006.

Nencka AS, ROWE DB. Theoretical results demonstrate fundamental differences in venous BOLD reducing activation methods. Proc. Intl. Soc. Magn. Reson. Med. 14:3269, 2006.

ROWE DB, Nencka AS. Complex activation suppresses venous BOLD in GE-EPI fMRI data. Proc. Intl. Soc. Magn. Reson. Med. 14:2834, 2006.

2005

Hoffmann RG, Deyoe EA Brefcynski JA, ROWE DB. Spatial-temporal modeling of visual cortex pathology. Proc. Am. Stat. Assoc. Biometrics Section, 10:223-229, 2005.

Meller CP, ROWE DB. An angular regression model for phase-only fMRI data. Proc. Am. Stat. Assoc. Biometrics Section, 10:316-323, 2005.

ROWE DB, Nencka AS. Magnitude and phase modeling for fMRI brain activation. Proc. Am. Stat. Assoc. Biometrics Section, 10:377-382, 2005.

Nencka AS, ROWE DB. Complex constant phase activation model removes venous BOLD contribution in fMRI. Proc. Intl. Soc. Magn. Reson. Med. 13:495, 2005.

Kufahl PR, ROWE DB, Li S-J. Exploring Intervoxel dependencies in human pharmalogical fMRI data. Proc. Intl. Soc. Magn. Reson. Med. 13:1579, 2005.

ROWE DB. Complex activation is more focal and concentrated to parenchymal tissue. Proc. Intl. Soc. Magn. Reson. Med. 13:1577, 2005.

2004

ROWE DB. A complex data method to compute fMRI activation. Proc. Am. Stat. Assoc. Biometrics Section, 9:440-447, 2004.

Logan BR, ROWE DB. A comparison of fMRI activation thresholding methods. Proc. Intl. Soc. Magn. Reson. Med. 12:1095, 2004.

ROWE DB, Logan BR. An fMRI activation method using complex data. Proc. IEEE International Symposium on Biomedical Imaging, 876-879, 2004.

2003

Kufahl PR, ROWE DB, Li S-J. A Bayesian hemodynamic drug response model for fMRI analysis. Proc. Intl. Soc. Magn. Reson. Med. 11:1907, 2003.

Bennett KM, Schmainda, KM, ROWE DB, Rebro K, Hyde JS. A stretched-exponential model of sub-voxel diffusion rates in cerebral tissue. Proc. Intl. Soc. Magn. Reson. Med. 11:1479, 2003.

Bennett KM, Hyde JS, Rebro K, ROWE DB, Rand S, Schmainda KM. Imaging brain tumor invasion. Proc. Intl. Soc. Magn. Reson. Med. 1:1285, 2003.

2002

Morgan SW, ROWE DB. The effect of detrending when computing regression coefficients in block design fMRI. Proc. Intl. Soc. Magn. Res. Med. 10:1424, 2002.

Strony AL, ROWE DB.A Re-examination of some Popular Latent Factor Estimation Methods. The Fifteenth Annual Investment Seminar, Cambridge, UK September 8-11, 2002.

2001

ROWE DB. Bayesian source separation of fMRI signals. AIP Conference Proceedings: Bayesian inference and maximum entropy methods in science and engineering 2000 (Ali Mohammad-Djafari, ed.). American Institute of Physics, Melville, NY, ), 2001.

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